BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033D10SP1|AL429740
(857 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig658 1694 0.0
>3x_Contig658
Length = 2378
Score = 1694 bits (853), Expect = 0.0
Identities = 855/857 (99%)
Strand = Plus / Plus
Query: 1 atcatcattgataaaacatctttatcatttataaaggaatataggcataatacgtaacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atcatcattgataaaacatctttatcatttataaaggaatataggcataatacgtaacac 480
Query: 61 atgtttcgattaaggattcaaactccaaacacattttgtatgtcagggttacgtcagtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atgtttcgattaaggattcaaactccaaacacattttgtatgtcagggttacgtcagtga 540
Query: 121 attcagatttatcaatagtatagttcattaaaatctctaagagaattattatttcttctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 attcagatttatcaatagtatagttcattaaaatctctaagagaattattatttcttctt 600
Query: 181 cttcttcttcttttattttcatttcatccatgttgttcatttatgaataaaagaaaacat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cttcttcttcttttattttcatttcatccatgttgttcatttatgaataaaagaaaacat 660
Query: 241 gagacaatcgttacaggacattagttaattattatgggattaaagttttcaatagtagtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gagacaatcgttacaggacattagttaattattatgggattaaagttttcaatagtagtt 720
Query: 301 ggagttgagatgggattgaattccagtaactctggctctttcttgatatttcatctttta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ggagttgagatgggattgaattccagtaactctggctctttcttgatatttcatctttta 780
Query: 361 tttttctcttgtttttttttttttttttttggtagcttttaacttttattccacttctct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tttttctcttgtttttttttttttttttttggtagcttttaacttttattccacttctct 840
Query: 421 ggatgattccttcattgggggttttacaagtattagtttaatacatcagtgggctcattg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 ggatgattccttcattgggggttttacaagtattagtttaatacatcagtgggctcattg 900
Query: 481 aatgtaacgcattaatcattcactgagaatatctctaccaaacatacctctcttcaacca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 aatgtaacgcattaatcattcactgagaatatctctaccaaacatacctctcttcaacca 960
Query: 541 atccatgaataaaaggactcttgttctccaagaaacggtttgggcaaagtaaatggrtct 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 961 atccatgaataaaaggactcttgttctccaagaaacggtttgggcaaagtaaatggatct 1020
Query: 601 ccacaaatacatagcaatcaaaccaccaacgaaagagtaaccaggcaagtcaaacacggc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 ccacaaatacatagcaatcaaaccaccaacgaaagagtaaccaggcaagtcaaacacggc 1080
Query: 661 agagttaccgatgtaggctaaggracctagatggacgtatctgaaaggtctataaacctt 720
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1081 agagttaccgatgtaggctaaggaacctagatggacgtatctgaaaggtctataaacctt 1140
Query: 721 ttcatcgatacccttttcgtggattccttggatgctgtccttattggcagatctagcaac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 ttcatcgatacccttttcgtggattccttggatgctgtccttattggcagatctagcaac 1200
Query: 781 cttagtcaatttcttacccaagtatttaccttgttgatgagctctttgagctgttgctgg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 cttagtcaatttcttacccaagtatttaccttgttgatgagctctttgagctgttgctgg 1260
Query: 841 taaagaggtaaccttag 857
|||||||||||||||||
Sbjct: 1261 taaagaggtaaccttag 1277
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 23,353
Number of Sequences: 1807
Number of extensions: 23353
Number of successful extensions: 4158
Number of sequences better than 1.0e-20: 1
length of query: 857
length of database: 10,358,551
effective HSP length: 16
effective length of query: 841
effective length of database: 10,329,639
effective search space: 8687226399
effective search space used: 8687226399
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)